FastQCFastQC Report
Mon 25 Mar 2013
106.fq

Summary

[OK] Basic Statistics

Measure Value
Filename 106.fq
File type Conventional base calls
Encoding Illumina 1.5
Total Sequences 34810316
Filtered Sequences 0
Sequence length 49
%GC 50

[OK] Per base sequence quality

Per base quality graph

[OK] Per sequence quality scores

Per Sequence quality graph

[FAIL] Per base sequence content

Per base sequence content

[FAIL] Per base GC content

Per base GC content graph

[WARN] Per sequence GC content

Per sequence GC content graph

[OK] Per base N content

N content graph

[OK] Sequence Length Distribution

Sequence length distribution

[FAIL] Sequence Duplication Levels

Duplication level graph

[FAIL] Overrepresented sequences

Sequence Count Percentage Possible Source
AAGCTGCCAGTTGAAGAACTGTTGGAATTCTCGGGTGCCAAGGAACTCC 1712527 4.91959624842245 RNA PCR Primer, Index 1 (100% over 27bp)
TTCAAGTAATCCAGGATAGGCTTGGAATTCTCGGGTGCCAAGGAACTCC 1681473 4.830387061122916 RNA PCR Primer, Index 1 (100% over 27bp)
AACATTCAACGCTGTCGGTGAGTTGGAATTCTCGGGTGCCAAGGAACTC 1511188 4.341207359335664 RNA PCR Primer, Index 1 (100% over 26bp)
CATAAAGTAGAAAGCACTACTTGGAATTCTCGGGTGCCAAGGAACTCCA 1068763 3.070247911567364 RNA PCR Primer, Index 1 (100% over 28bp)
TGAGGTAGTAGATTGTATAGTTTGGAATTCTCGGGTGCCAAGGAACTCC 993135 2.8529904755820086 RNA PCR Primer, Index 1 (100% over 27bp)
AACATTCAACGCTGTCGGTGAGTGGAATTCTCGGGTGCCAAGGAACTCC 864049 2.482163620692211 RNA PCR Primer, Index 1 (100% over 27bp)
CAACGGAATCCCAAAAGCAGCTGTGGAATTCTCGGGTGCCAAGGAACTC 849309 2.4398198511039086 RNA PCR Primer, Index 1 (100% over 26bp)
GGCTGGTCCGATGGTAGTGGGTTACCAGAACTTGGAATTCTCGGGTGCC 796670 2.2886031830334432 No Hit
TAGCTTATCAGACTGATGTTGACTTGGAATTCTCGGGTGCCAAGGAACT 764243 2.195449762650819 RNA PCR Primer, Index 1 (100% over 25bp)
TAGCTTATCAGACTGATGTTGACTGGAATTCTCGGGTGCCAAGGAACTC 709409 2.0379274925283646 RNA PCR Primer, Index 1 (100% over 26bp)
TAGCTTATCAGACTGATGTTGATGGAATTCTCGGGTGCCAAGGAACTCC 668848 1.9214074356578663 RNA PCR Primer, Index 1 (100% over 27bp)
TCTCCCAACCCTTGTACCAGTGTGGAATTCTCGGGTGCCAAGGAACTCC 468556 1.346026275659204 RNA PCR Primer, Index 1 (100% over 27bp)
TATTGCACTTGTCCCGGCCTGTTGGAATTCTCGGGTGCCAAGGAACTCC 404274 1.1613626259526055 RNA PCR Primer, Index 1 (100% over 27bp)
TGTAAACATCCTTGACTGGAAGCTTGGAATTCTCGGGTGCCAAGGAACT 398720 1.1454075854985055 RNA PCR Primer, Index 1 (100% over 25bp)
TTCACAGTGGCTAAGTTCTGTGGAATTCTCGGGTGCCAAGGAACTCCAG 390101 1.1206476838647486 RNA PCR Primer, Index 1 (100% over 29bp)
TGAGGTAGTAGATTGTATAGTTGGAATTCTCGGGTGCCAAGGAACTCCA 351342 1.0093042533713281 RNA PCR Primer, Index 1 (100% over 28bp)
TCAGTGCACTACAGAACTTTGTTGGAATTCTCGGGTGCCAAGGAACTCC 301176 0.8651918011890499 RNA PCR Primer, Index 1 (100% over 27bp)
TTCAAGTAATTCAGGATAGGTTTGGAATTCTCGGGTGCCAAGGAACTCC 294534 0.8461112504695447 RNA PCR Primer, Index 1 (100% over 27bp)
CCCCCCACTGCTAAATTTGACTGGCTTTGGAATTCTCGGGTGCCAAGGA 288975 0.8301418464572399 RNA PCR Primer, Index 1 (100% over 22bp)
TAGCAGCACGTAAATATTGGCGTGGAATTCTCGGGTGCCAAGGAACTCC 265552 0.7628543216901564 RNA PCR Primer, Index 1 (100% over 27bp)
CAAAGAATTCTCCTTTTGGGCTTGGAATTCTCGGGTGCCAAGGAACTCC 257424 0.7395049214721291 RNA PCR Primer, Index 1 (100% over 27bp)
TGAGGTAGTAGTTTGTGCTGTTTGGAATTCTCGGGTGCCAAGGAACTCC 247312 0.7104560613583628 RNA PCR Primer, Index 1 (100% over 27bp)
TGTAAACATCCCCGACTGGAAGCTTGGAATTCTCGGGTGCCAAGGAACT 236358 0.6789883780428767 RNA PCR Primer, Index 1 (100% over 25bp)
TGAGGTAGTAGGTTGTATAGTTTGGAATTCTCGGGTGCCAAGGAACTCC 225312 0.6472564052564188 RNA PCR Primer, Index 1 (100% over 27bp)
AACATTCAACGCTGTCGGTGATGGAATTCTCGGGTGCCAAGGAACTCCA 216306 0.6213847642175957 RNA PCR Primer, Index 1 (100% over 28bp)
TCTCCCAACCCTTGTACCAGTGTTGGAATTCTCGGGTGCCAAGGAACTC 213130 0.6122610320457877 RNA PCR Primer, Index 1 (100% over 26bp)
CATTGCACTTGTCTCGGTCTGATGGAATTCTCGGGTGCCAAGGAACTCC 203343 0.5841458032153457 RNA PCR Primer, Index 1 (100% over 27bp)
TTCACAGTGGCTAAGTTCTGCTGGAATTCTCGGGTGCCAAGGAACTCCA 196840 0.5654645594139392 RNA PCR Primer, Index 1 (100% over 28bp)
TCTCCCAACCCTTGTACCAGTTGGAATTCTCGGGTGCCAAGGAACTCCA 188993 0.5429223911670322 RNA PCR Primer, Index 1 (100% over 28bp)
TATTGCACTTGTCCCGGCCTGTATTGGAATTCTCGGGTGCCAAGGAACT 170567 0.48998980647001306 RNA PCR Primer, Index 1 (100% over 25bp)
TCGAGGAGCTCACAGTCTAGTTGGAATTCTCGGGTGCCAAGGAACTCCA 167594 0.48144923476132767 RNA PCR Primer, Index 1 (100% over 28bp)
TTCAAGTAATCCAGGATAGGCTTTGGAATTCTCGGGTGCCAAGGAACTC 164411 0.47230539360803275 RNA PCR Primer, Index 1 (100% over 26bp)
TGCCTATGCTGAAACCCAGAGGCTGTTTCTGAGCTGGAATTCTCGGGTG 158098 0.4541699650184158 No Hit
CAAAGAATTCTCCTTTTGGGCTTTGGAATTCTCGGGTGCCAAGGAACTC 150752 0.4330670253036485 RNA PCR Primer, Index 1 (100% over 26bp)
TGAGGTAGTAGGTTGTATAGTTGGAATTCTCGGGTGCCAAGGAACTCCA 136521 0.3921854659406137 RNA PCR Primer, Index 1 (100% over 28bp)
TAGCTTATCAGACTGATGTTGACCTGGAATTCTCGGGTGCCAAGGAACT 134599 0.3866641141666166 RNA PCR Primer, Index 1 (100% over 25bp)
TAGCTTATCAGACTGATGTTGTGGAATTCTCGGGTGCCAAGGAACTCCA 117748 0.33825605030416844 RNA PCR Primer, Index 1 (100% over 28bp)
TATTGCACTTGTCCCGGCCTGTAATGGAATTCTCGGGTGCCAAGGAACT 116916 0.33586595421885856 RNA PCR Primer, Index 1 (100% over 25bp)
CTGACCTATGAATTGACAGCCTGGAATTCTCGGGTGCCAAGGAACTCCA 112573 0.32338976756200666 RNA PCR Primer, Index 1 (100% over 28bp)
TTCAAGTAATCCAGGATAGGCTGGAATTCTCGGGTGCCAAGGAACTCCA 110149 0.3164263145442288 RNA PCR Primer, Index 1 (100% over 28bp)
TGAGGTAGTAGTTTGTACAGTTTGGAATTCTCGGGTGCCAAGGAACTCC 104819 0.3011147614977123 RNA PCR Primer, Index 1 (100% over 27bp)
TCTCCCAACCCTTGTACCAGTGATGGAATTCTCGGGTGCCAAGGAACTC 103144 0.2963029694990416 RNA PCR Primer, Index 1 (100% over 26bp)
AGCTCGGTCTGAGGCCCCTCAGTTGGAATTCTCGGGTGCCAAGGAACTC 99749 0.28655011347785525 RNA PCR Primer, Index 1 (100% over 26bp)
AGTGTTTCCTACTTTATGGATGTGGAATTCTCGGGTGCCAAGGAACTCC 97264 0.27941142504997657 RNA PCR Primer, Index 1 (100% over 27bp)
TCAGTGCACTACAGAACTTTGTCTGGAATTCTCGGGTGCCAAGGAACTC 95247 0.2736171656700847 RNA PCR Primer, Index 1 (100% over 26bp)
CAACGGAATCCCAAAAGCAGCTGTTGGAATTCTCGGGTGCCAAGGAACT 93491 0.26857268402849316 RNA PCR Primer, Index 1 (100% over 25bp)
TGAGGTAGTAGATTGTATAGTTTTGGAATTCTCGGGTGCCAAGGAACTC 89038 0.2557804990911315 RNA PCR Primer, Index 1 (100% over 26bp)
AGAGGTAAAAAATTGATTTGACTTGGAATTCTCGGGTGCCAAGGAACTC 88756 0.2549703944083702 RNA PCR Primer, Index 1 (100% over 26bp)
GCCTATGCTGAAACCCAGAGGCTGTTTCTGAGCTGGAATTCTCGGGTGC 86196 0.24761625260741674 No Hit
CGACACAAGGGTTTGTTGGAATTCTCGGGTGCCAAGGAACTCCAGTCAC 80855 0.23227309973284932 RNA PCR Primer, Index 1 (100% over 33bp)
TGTAGTGTTTCCTACTTTATGGATGGAATTCTCGGGTGCCAAGGAACTC 80655 0.23169855740464979 RNA PCR Primer, Index 1 (100% over 26bp)
AACATTCAACGCTGTCGGTGAGTTTGGAATTCTCGGGTGCCAAGGAACT 80329 0.23076205340968464 RNA PCR Primer, Index 1 (100% over 25bp)
TAGCTTATCAGACTGATGTTGACATGGAATTCTCGGGTGCCAAGGAACT 77683 0.22316085840760538 RNA PCR Primer, Index 1 (100% over 25bp)
GACACAAGGGTTTGTTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACG 70381 0.20218431800504197 RNA PCR Primer, Index 6 (100% over 34bp)
AACATTCAACGCTGTCGGTGAGATGGAATTCTCGGGTGCCAAGGAACTC 68749 0.1974960526069341 RNA PCR Primer, Index 1 (100% over 26bp)
TAGCAGCACGTAAATATTGGTGTGGAATTCTCGGGTGCCAAGGAACTCC 67687 0.1944452328441948 RNA PCR Primer, Index 1 (100% over 27bp)
TATTGCACTTGTCCCGGCCTGTATGGAATTCTCGGGTGCCAAGGAACTC 66441 0.19086583413951197 RNA PCR Primer, Index 1 (100% over 26bp)
ACTGGACTTGGAGTCAGAAGGCTGGAATTCTCGGGTGCCAAGGAACTCC 66182 0.19012180182449362 RNA PCR Primer, Index 1 (100% over 27bp)
CATAAAGTAGAAAGCACTACTATGGAATTCTCGGGTGCCAAGGAACTCC 65684 0.18869119142727692 RNA PCR Primer, Index 1 (100% over 27bp)
TATTGCACTTGTCCCGGCCTGTTTGGAATTCTCGGGTGCCAAGGAACTC 65006 0.18674349293468062 RNA PCR Primer, Index 1 (100% over 26bp)
ACTAGACCTAGCCCAAAGATACCCTTGGAATTCTCGGGTGCCAAGGAAC 63851 0.18342551098932855 RNA PCR Primer, Index 1 (100% over 24bp)
TGTAAACATCCTACACTCTCAGCTTGGAATTCTCGGGTGCCAAGGAACT 63276 0.18177370179575503 RNA PCR Primer, Index 1 (100% over 25bp)
TCGAGGAGCTCACAGTCTAGTATGGAATTCTCGGGTGCCAAGGAACTCC 62227 0.1787602272843487 RNA PCR Primer, Index 1 (100% over 27bp)
CCCATAAAGTAGAAAGCACTACTGGAATTCTCGGGTGCCAAGGAACTCC 62024 0.17817706682122622 RNA PCR Primer, Index 1 (100% over 27bp)
TTCACAGTGGCTAAGTTCTGCTTGGAATTCTCGGGTGCCAAGGAACTCC 60842 0.1747815216615672 RNA PCR Primer, Index 1 (100% over 27bp)
CATTGCACTTGTCTCGGTCTTGGAATTCTCGGGTGCCAAGGAACTCCAG 60274 0.17314982144948066 RNA PCR Primer, Index 1 (100% over 29bp)
TGAGGTAGTAGATTGTATAGTTATGGAATTCTCGGGTGCCAAGGAACTC 58900 0.16920271565475015 RNA PCR Primer, Index 1 (100% over 26bp)
TGTAAACATCCCCGACTGGAAGCTGGAATTCTCGGGTGCCAAGGAACTC 57093 0.16401172571946776 RNA PCR Primer, Index 1 (100% over 26bp)
GGCTGGTCCGATGGTAGTGGGTTACCAGAACTGGAATTCTCGGGTGCCA 56719 0.16293733156573473 No Hit
TGTAAACATCCTACACTCAGCTTGGAATTCTCGGGTGCCAAGGAACTCC 55890 0.16055585361534783 RNA PCR Primer, Index 1 (100% over 27bp)
AGCAGCATTGTACAGGGCTATGATGGAATTCTCGGGTGCCAAGGAACTC 55855 0.1604553087079129 RNA PCR Primer, Index 1 (100% over 26bp)
GCATTGGTGGTTCAGTGGTAGAATTCTCGCCTTGGAATTCTCGGGTGCC 53313 0.15315287571649738 No Hit
CATAAAGTAGAAAGCACTACTGGAATTCTCGGGTGCCAAGGAACTCCAG 49741 0.14289154973485446 RNA PCR Primer, Index 1 (100% over 29bp)
TGGGGGGCCCAAGTCCTTCTGATCGAGGCCTGGAATTCTCGGGTGCCAA 48600 0.13961378575247638 No Hit
TGAGGTAGTAGTTTGTGCTGTTATGGAATTCTCGGGTGCCAAGGAACTC 48342 0.138872626149099 RNA PCR Primer, Index 1 (100% over 26bp)
CAAAGTGCTGTTCGTGCAGGTTGGAATTCTCGGGTGCCAAGGAACTCCA 47134 0.13540239048677408 RNA PCR Primer, Index 1 (100% over 28bp)
TAGCACCATCTGAAATCGGTTTGGAATTCTCGGGTGCCAAGGAACTCCA 45673 0.1312053587792768 RNA PCR Primer, Index 1 (100% over 28bp)
TACCCTGTAGATCCGAATTTGTTGGAATTCTCGGGTGCCAAGGAACTCC 45379 0.13036078155682357 RNA PCR Primer, Index 1 (100% over 27bp)
TGAGGGGCAGAGAGCGAGACTTTTGGAATTCTCGGGTGCCAAGGAACTC 45263 0.13002754700646788 RNA PCR Primer, Index 1 (100% over 26bp)
CAAAGAATTCTCCTTTTGGGCTGGAATTCTCGGGTGCCAAGGAACTCCA 43850 0.12596840545773846 RNA PCR Primer, Index 1 (100% over 28bp)
ACCGGGCGGAAACACCATGGAATTCTCGGGTGCCAAGGAACTCCAGTCA 43206 0.12411837916093608 RNA PCR Primer, Index 1 (100% over 32bp)
TATTGCACTTGTCCCGGCCTGTTTTGGAATTCTCGGGTGCCAAGGAACT 42213 0.12126577650142562 RNA PCR Primer, Index 1 (100% over 25bp)
ACCCCGTGATGGAACTGAGGATCTGAGGTGGAATTCTCGGGTGCCAAGG 42171 0.12114512261250372 Illumina RNA RT Primer (100% over 21bp)
TTCAAGTAATTCAGGATAGGTTGGAATTCTCGGGTGCCAAGGAACTCCA 42053 0.12080614263886601 RNA PCR Primer, Index 1 (100% over 28bp)
TGAGGTAGTAGTTTGTACAGTTGGAATTCTCGGGTGCCAAGGAACTCCA 41885 0.12032352708317845 RNA PCR Primer, Index 1 (100% over 28bp)
TGTGCAAATCCATGCAAAACTGTGGAATTCTCGGGTGCCAAGGAACTCC 41491 0.11919167869662545 RNA PCR Primer, Index 1 (100% over 27bp)
TACCCATTGCATATCGGAGCTGTGGAATTCTCGGGTGCCAAGGAACTCC 40393 0.11603744131481024 RNA PCR Primer, Index 1 (100% over 27bp)
TTCACAGTGGCTAAGTTCCGTGGAATTCTCGGGTGCCAAGGAACTCCAG 40186 0.11544279000512377 RNA PCR Primer, Index 1 (100% over 29bp)
CAAAGTGATGATAAAGTATATCTGAGGTGGAATTCTCGGGTGCCAAGGA 39635 0.11385992589093417 RNA PCR Primer, Index 1 (100% over 22bp)
CTAGACTGAAGCTCCTTGAGGATGGAATTCTCGGGTGCCAAGGAACTCC 39288 0.11286309495150805 RNA PCR Primer, Index 1 (100% over 27bp)
TGTAAACATCCCCGACTGGATGGAATTCTCGGGTGCCAAGGAACTCCAG 38786 0.11142099370772733 RNA PCR Primer, Index 1 (100% over 29bp)
AAGCTGCCAGTTGAAGAACTGTGGAATTCTCGGGTGCCAAGGAACTCCA 38007 0.1091831513393903 RNA PCR Primer, Index 1 (100% over 28bp)
TGTAAACATCCTTGACTGGAAGCTGGAATTCTCGGGTGCCAAGGAACTC 37854 0.1087436264583177 RNA PCR Primer, Index 1 (100% over 26bp)
CTAGACTGAAGCTCCTTGAGGTGGAATTCTCGGGTGCCAAGGAACTCCA 36155 0.10386288938026302 RNA PCR Primer, Index 1 (100% over 28bp)
AGAGGTAGTAGGTTGCATAGTTTGGAATTCTCGGGTGCCAAGGAACTCC 36071 0.10362158160241923 RNA PCR Primer, Index 1 (100% over 27bp)
GTAGTGTTTCCTACTTTATGGATGGAATTCTCGGGTGCCAAGGAACTCC 35641 0.10238631559679034 RNA PCR Primer, Index 1 (100% over 27bp)
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCTGGAATTCTCGGGTGCC 35529 0.10206457189299863 No Hit
GCGGGTGATGCGAACTGGAGTCTGAGTTGGAATTCTCGGGTGCCAAGGA 34950 0.10040127185286109 RNA PCR Primer, Index 1 (100% over 22bp)

[FAIL] Kmer Content

Kmer graph

Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position
TTCTC 35486050 27.627193 411.607 28
AATTC 35600490 27.018236 401.12256 26
ATTCT 35292895 25.83492 387.37674 27
TGCCA 34064700 24.725792 381.22815 36
TCTCG 35228550 24.663752 370.0126 29
GCCAA 32032650 24.105698 395.96997 37
CCAAG 31962995 24.05328 396.01517 38
GAACT 33926705 23.154106 358.57608 43
AACTC 27081065 22.662472 437.90918 44
CTCGG 35123220 22.112812 332.53653 30
GAATT 35569200 22.015064 327.738 25
GTGCC 33395415 21.025026 330.95386 35
GGAAT 35737275 19.890814 294.505 24
TGGAA 35490245 19.75332 294.11768 23
CAAGG 31866865 19.557392 323.15848 39
GGAAC 30544240 18.745668 322.50262 42
ACTCC 20485645 18.23268 465.81516 45
AAGGA 31315570 18.070602 303.90494 40
TCGGG 34743500 17.838896 271.12115 31
AGGAA 30711485 17.722017 303.6736 41
CGGGT 34386345 17.655518 270.2651 32
GGTGC 33918900 17.415508 270.24634 34
GGGTG 34265490 14.348159 220.49881 33
TTGGA 19605080 10.524913 178.95358 22
CTCCA 8828755 7.8577876 169.52406 45
TCCAG 6873980 4.9894633 75.65371 10
CCAGT 6273420 4.5535483 60.984276 7
CTTGG 7906610 4.514394 60.600018 21
TTCAA 5922495 4.4947524 106.086205 5
CTGGA 6214280 3.6785886 34.822372 23
ACTTG 5325515 3.5056355 45.6408 7
AACAT 4443355 3.496176 112.46117 1
GACTG 5504855 3.2586393 70.85248 11
TGTTG 6255975 3.239393 61.28693 17
GTTGG 6893565 3.2099464 57.054672 21
CAACG 4152555 3.124944 104.13933 7
GCTGT 5323170 3.0393417 81.485085 11
AATCC 3547975 2.9690814 85.72287 8
ATGGA 5285125 2.9416184 43.104057 22
ATTCA 3687345 2.7984326 109.17002 4
TGATG 5206205 2.7949314 63.9821 14
AAGTA 4319525 2.7718074 80.11428 4
GTGGA 5731610 2.7670166 49.192123 22
GCACT 3775750 2.74062 50.978924 5
CATTC 3351815 2.7054555 115.85726 3
GTAGT 5003105 2.6858976 68.16972 5
TCAAC 3196040 2.6745687 117.12847 6
AGAAC 3766935 2.6653588 59.526005 15
AGTTG 4948810 2.6567497 45.109074 9
ACATT 3409240 2.5873704 108.69891 2
TTTGG 4995910 2.5869215 53.207005 21
GTTGA 4619455 2.4799368 60.4613 18
CTGTC 3541770 2.4796176 99.820465 12
CCCAA 2646800 2.4423234 47.696674 4
AGTAG 4336545 2.4136539 69.73203 7
TCGGT 4198735 2.397329 81.29207 15
AGCTT 3641205 2.3969018 78.103165 2
CTGAT 3627010 2.3875575 78.74473 13
AACGC 3151690 2.3717577 104.20858 8
CAGTC 3244085 2.354712 13.627682 42
ACTGA 3399790 2.3202693 81.32747 12
ACGCT 3122880 2.2667358 100.408005 9
TTGTA 3788190 2.2614987 63.206493 13
CTGTT 3547455 2.2523754 68.35539 19
TTGAC 3365565 2.2154558 52.808006 19
AGCTG 3722040 2.2032888 49.576683 2
GGTAG 4510635 2.1775737 61.626316 4
AGACT 3173155 2.165597 81.48532 10
TCAGA 3171420 2.1644127 82.86816 8
TCCCA 2417665 2.1517756 45.93579 3
ATCAG 3081955 2.1033552 81.40648 7
GTAGA 3775890 2.1016016 41.647114 8
CAAGT 3073060 2.0972846 83.7474 3
CAGAC 2777440 2.0901215 89.65383 9
AAGCT 3056195 2.0857747 57.56129 1
TGACT 3165675 2.083874 46.227516 20
TATCA 2744535 2.0829067 90.40484 6
CGCTG 3289155 2.07078 87.2069 10
TTATC 2825945 2.0686333 87.18251 5
GCTTG 3619285 2.0664837 58.284874 20
ATCCA 2436465 2.0389273 85.664185 9
CTTAT 2716435 1.9884706 87.084175 4
TCAAG 2877225 1.9636322 83.52878 2
TACCA 2291240 1.9173974 43.388145 15
CAGGA 3071650 1.8851389 76.659256 12
GGCTT 3301130 1.8848284 63.626175 19
GTTTG 3639135 1.8843727 49.356133 20
AGTAA 2935135 1.8834546 79.00915 5
GTAAT 3036220 1.8792264 76.20623 6
TGTCG 3290425 1.8787159 81.36497 13
ACTGG 3163330 1.8725564 28.734983 15
TAGTA 3022895 1.870979 78.578064 6
AAAGC 2621345 1.8547772 40.970093 11
AAGCA 2605425 1.8435128 40.893997 12
AGTGG 3814060 1.8412919 22.804945 16
TAGCT 2775995 1.8273586 77.919556 1
AGGAT 3270325 1.8202122 68.532875 13
TAATC 2394615 1.8173422 77.78683 7
CACTA 2169850 1.8158137 48.054554 15
GCTTA 2721535 1.7915093 78.2417 3
AACTG 2619235 1.7875607 57.124756 17
GTCGG 3479070 1.786313 73.2662 14
CAGTG 3017065 1.7859738 24.87835 18
CGGTG 3459620 1.7763264 72.8877 16
CTTGT 2797665 1.7763132 43.888226 8
TGAGG 3657480 1.7657006 61.36009 1
TAGTT 2951640 1.7620896 61.166134 18
AGGTA 3162120 1.759987 73.47395 3
GATGG 3628925 1.7519153 25.612165 21
CCAGG 2679675 1.7490934 68.04351 11
AGGCT 2927455 1.7329285 58.593105 18
AGTCA 2534895 1.7300007 12.819655 45
AAGAA 2589540 1.7227843 56.680656 14
ATGTT 2883820 1.721602 71.11738 16
ACTAC 2023800 1.6935935 47.803005 16
GATGT 3117580 1.6736608 64.013885 15
CAGTT 2537565 1.6704069 55.35538 8
ACCAG 2214465 1.666463 38.524006 16
AGCAC 2213735 1.6659136 43.506493 13
TGCAC 2283115 1.6571941 51.992397 4
CCTTG 2363260 1.6545347 53.792774 10
GGATA 2925050 1.6280376 68.520004 14
GAGGT 3369885 1.6268601 64.521904 2
ATAGG 2875370 1.6003863 69.094574 16
GATAG 2873270 1.5992175 69.482544 15
GGTGA 3295795 1.5910921 64.87138 17
TGAGT 2942775 1.5798174 63.374557 19
TGTGG 3347795 1.5588802 19.417454 21
CTACT 1928295 1.5564451 45.857952 17
CTGCC 2000105 1.544037 64.87777 4
TCTCC 1794250 1.5402904 44.027702 1
TGTAT 2535940 1.5139223 58.329384 14
ACTGT 2294830 1.5106213 54.851883 18
ATCCC 1684335 1.4990956 59.65729 8
TCTGA 2275950 1.4981931 9.966715 18
GCTGG 2866405 1.471743 25.774061 2
CACTT 1813755 1.463993 55.827213 6
AGTTT 2425745 1.4481374 42.41866 19
TAGGC 2431050 1.4390776 59.651665 17
GTCAC 1964610 1.4260079 13.588209 44
AACCC 1538575 1.4197136 47.762653 7
GTGAG 2922595 1.4109247 58.867584 18
ATAGT 2276810 1.4092 59.84185 17
GTATA 2213575 1.3700615 58.822517 15
CAGAA 1928265 1.3643767 32.947975 26
GCCAG 2066820 1.349067 54.822067 6
AACTT 1777375 1.348901 33.08103 29
TATAG 2168380 1.3420888 58.584953 16
ACCCT 1507705 1.3418909 46.09066 8
ATTGT 2199940 1.3133348 44.877045 12
CTCCC 1372205 1.29891 48.755463 2
TTGAA 2053295 1.2708584 52.178493 11
GCCTG 2009635 1.2652223 33.46849 17
TTGTC 1983570 1.2594223 43.859875 9
TGAAG 2248755 1.2516222 46.91565 12
TCCCG 1615520 1.2471458 41.387394 12
CTGTG 2177580 1.2433211 23.181166 21
ATTGC 1885915 1.2414442 46.950546 2
GCTGC 1960130 1.2340552 52.78918 3
TCACA 1467960 1.2284452 35.67932 2
TATTG 2051665 1.2248166 32.751774 1
TCCTT 1562680 1.2166038 19.550379 9
AAAGT 1889065 1.2121991 38.725124 4
TTGCA 1818800 1.1972643 47.0402 3
ACAGT 1748505 1.1933098 27.505709 4
TAGAA 1857050 1.1916554 37.231396 8
TAGAT 1922725 1.190044 45.884113 9
TACTT 1612610 1.1804544 37.166424 18
TCACG 1623470 1.1783922 13.474503 45
CATAA 1477810 1.162789 45.20111 1
GTAAA 1797625 1.1535227 33.88337 2
GCAGC 1765965 1.1526912 30.162407 17
AGAAA 1732150 1.1523749 41.08215 9
CCTGT 1645030 1.1516969 35.93576 18
GAAGA 1989640 1.1481189 48.494152 13
TTCTG 1801760 1.1439863 23.092987 16
CAACC 1238310 1.1426454 47.721546 6
AGATT 1840185 1.138957 45.996895 10
ATAAA 1537430 1.1374134 42.589127 2
CCAAC 1231425 1.1362922 47.744137 5
CACAG 1507800 1.1346726 31.886023 3
GATTG 2092980 1.1236084 40.58949 11
CATCC 1259390 1.120885 47.019627 7
AGCAG 1822325 1.1184008 28.658789 16
CCAAA 1283965 1.1139764 40.42304 11
CCCTT 1290585 1.1079144 44.6497 9
AAACA 1347510 1.0992476 43.146175 4
ACATC 1312595 1.0984298 44.24232 6
CCCGG 1531260 1.0630143 37.264263 13
GAGTT 1976465 1.0610577 41.0105 20
CCAGA 1404635 1.0570374 35.019314 25
GACTT 1602035 1.0545741 27.207916 21
GGCTG 2040865 1.0478731 25.121098 1
TGTAC 1576325 1.03765 34.083244 13
CTTTG 1619725 1.0284073 16.443716 17
GTCCC 1323115 1.0214156 41.461563 11
GCTAA 1487220 1.0149895 39.15954 10
TAAAG 1577795 1.0124594 36.999615 3
TTTGT 1745425 1.0050427 17.711695 12
GGCCT 1592945 1.0028834 33.913784 16
CCGGC 1427495 0.9909796 37.28703 14
CCCCC 944960 0.9863113 19.136953 1
CAAAA 1207630 0.9851387 38.334053 12
TGCTG 1723915 0.9842945 10.041717 16
CAGCT 1351565 0.9810305 35.84862 18
CGGCC 1408545 0.9778244 37.315613 15
TAAAC 1236565 0.9729695 41.500904 3
TGGCT 1694640 0.9675795 23.329836 8
CCTGG 1532100 0.96457666 5.7279325 23
TCCGA 1315160 0.95460606 36.2966 7
TAGTG 1741580 0.9349606 26.425264 15
GAAAG 1608480 0.928171 33.648357 10
CACGA 1223895 0.92102414 9.949297 45
GTACC 1260055 0.9146082 37.559734 14
TGTCC 1294055 0.90597683 36.895332 10
TTACC 1120095 0.90409726 36.515957 22
TGTAA 1412060 0.8739749 32.69167 1
AAAAG 1264310 0.8411276 31.258131 13
ACTTT 1148130 0.84044814 18.283674 16
GAATC 1228880 0.8386791 31.874426 6
CCGAT 1148370 0.83354187 34.269398 8
GGGTT 1767735 0.823135 21.96482 19
TCAGT 1232725 0.8114678 18.152662 1
CGGAA 1319725 0.809944 28.67362 4
TGTTT 1370410 0.78910327 8.867387 19
GGTCC 1225900 0.7717999 31.516052 5
CTGAA 1111810 0.7587818 6.2677975 9
ACGGA 1231760 0.7559581 28.57117 3
CATTG 1147360 0.75527453 10.809308 1
TTCAC 935270 0.75491375 32.286724 1
GTCCG 1189300 0.74875736 31.522507 6
CTCCT 866660 0.7439922 20.496265 10
GGCTA 1243185 0.7359125 23.899107 9
TACAG 1069945 0.73021 16.259352 10
TTTTG 1265190 0.728516 14.1237335 14
TGGTA 1351140 0.7253545 25.21766 12
GGTTA 1347230 0.7232554 24.472666 20
CGATG 1214360 0.7188493 28.050066 9
AAGTT 1160710 0.7184054 25.011751 13
AGTTC 1088520 0.71654177 26.580313 14
CTGGT 1247020 0.7120043 28.694517 3
TGGTC 1235690 0.70553523 28.539783 4
GTTAC 1067165 0.70248437 29.86806 21
CAAAG 990015 0.7005019 22.330868 1
ATTGG 1297640 0.6966331 9.803906 16
AACGG 1124375 0.6900536 28.507322 2
CTACA 818965 0.6853413 19.019728 9
AGCTC 939800 0.6821518 9.47688 7
CTAAG 992160 0.6771237 27.540842 11
AGTGT 1260360 0.6766194 17.669456 19
ATCCT 836265 0.6750007 26.228012 8
CTGCT 963600 0.674623 12.007527 8
AGGTT 1252350 0.6723193 13.917435 10
GAAGC 1093260 0.6709576 22.606222 19
ATGGT 1246750 0.66931295 25.204489 11
TGGGT 1395890 0.64998764 21.772259 18
TATGG 1207495 0.6482391 7.046445 22
TAAAT 905290 0.6459955 13.784071 11
GCTTT 1010690 0.6417145 11.307032 20
TAAGT 1033010 0.6393672 24.96635 12
GTTCT 1003215 0.6369684 22.958416 15
GTCTG 1107535 0.6323633 7.706654 17
CTTGA 960485 0.63225996 16.521471 11
GAGCT 1065880 0.63095546 7.5050106 6
ACGAT 924305 0.63081443 6.5796595 45
GTGAT 1169980 0.6280993 8.326843 5
GACCT 863125 0.6264974 5.399889 3
TTGAT 1023765 0.61117405 19.342104 19
TAGGT 1129455 0.60634357 13.798069 9
ATTTG 1010365 0.6031744 10.26566 15
TGTCT 944175 0.59948224 10.587662 10
GGTTT 1134225 0.58731073 8.995358 19
CTTTT 829965 0.58600104 16.936632 13
CCCCA 590180 0.57919633 17.37428 3
CTATG 868480 0.5716957 6.3018827 4
AAAGA 845500 0.56249917 15.88332 2
CGATC 774460 0.5621401 6.1306243 45
CAGCA 746670 0.5618955 17.460512 4
GTGGG 1338650 0.56053954 19.587873 17
CCCAC 565640 0.5551131 16.803173 4
GTGCA 930365 0.55073637 14.719495 4
AGAAT 849390 0.54504734 15.453287 4
AGTGC 920330 0.544796 14.698537 3
GAGTG 1120020 0.5407057 20.376274 20
ATCTG 821020 0.54045415 5.72839 8
GTTTC 848415 0.5386816 5.1981807 25
GTGGC 1047785 0.53798056 21.200699 7
CCCCG 631220 0.5373115 17.414587 10
CTGTA 808045 0.5319131 13.53565 19
GTGCT 917895 0.5240856 9.955646 15
CCACT 587310 0.5227189 15.215881 5
TAGCA 760055 0.518718 21.838903 1
CTCAC 582800 0.51870495 11.17969 9
TTGTT 891695 0.51345176 11.561352 19
TTCAG 769875 0.5067868 15.295147 10
ACAGA 715700 0.5064057 17.707438 11
TCCCC 534020 0.50549585 19.35682 9
TGAAA 783660 0.5028689 6.1621437 11
AATTT 723645 0.49806508 11.83256 14
CCTAC 558235 0.49684152 10.233539 10
GGAAG 983730 0.49237084 19.607882 18
GGTTG 1042410 0.4853919 12.124674 11
TTGTG 926050 0.47951597 10.222245 13
TCTGT 755185 0.4794874 15.718156 17
CCCAG 598220 0.47879213 6.61113 15
GCCCA 588020 0.47062847 5.2701087 11
CCTTT 603325 0.46971068 18.589643 12
AAATT 656395 0.46838942 12.269919 13
TCCTA 576565 0.46538097 9.317265 9
CCTAT 576045 0.46496126 6.8944297 3
CACTG 640470 0.46488377 12.538178 6
GGGCT 893765 0.45889968 11.595645 18
ACCCA 493785 0.45563802 7.615581 14
ACTGC 623060 0.45224676 12.448357 7
ACCAT 530730 0.44413522 7.459868 5
CCGAC 551495 0.44139525 16.4568 12
TTTGA 735340 0.43898812 10.209917 16
TAATT 637260 0.43860865 14.278424 7
CACCA 469370 0.4331092 8.212137 4
CCCGA 538815 0.4312467 16.388552 11
GTTGT 832760 0.4312097 12.9478445 12
GGTCT 749885 0.4281578 9.482515 16
ACTCT 529700 0.42755336 5.3225074 15
CTGGC 676905 0.42616463 10.61035 21
CGACT 582420 0.4227483 15.167684 13
GTGTG 906180 0.42195722 13.090256 20
TGACA 618020 0.4217828 5.034649 14
CGGTC 660625 0.41591507 10.476927 15
CGTGG 805000 0.4133237 7.183025 21
ACCTG 567130 0.4116501 5.227081 22
TTTCC 526775 0.41011366 5.4207363 8
GCTCA 548530 0.39814937 9.416455 8
CTCAG 546700 0.39682102 7.482106 18
CACGT 529400 0.38426384 13.130025 7
CTGAC 528315 0.3834763 5.2789383 1
TTCCT 490850 0.38214475 5.4431853 9
GCTGA 641335 0.37964296 5.9244685 8
TTTCT 534275 0.37722757 5.8381624 26
ATGAA 582165 0.373571 7.4286942 8
CTAAA 471680 0.37113312 13.46472 11
TGAAT 597515 0.36982366 6.306754 9
GTCTC 527420 0.3692504 11.586352 11
GTAGG 764810 0.36922294 12.539963 8
GTGTT 712495 0.36893556 5.574551 20
AAATA 495170 0.36633408 13.678657 12
TGACC 503830 0.3657039 5.3537116 2
GCATT 555430 0.36562377 5.7700133 1
GAAAC 515380 0.36466587 5.928535 11
AAATC 451590 0.3553257 7.0295978 13
TCAGG 597905 0.3539342 12.495432 11
CACTC 396815 0.35317415 6.409747 14
TGGGC 687250 0.35286546 12.531258 17
AAACC 404445 0.3508991 7.1872854 12
TGCTA 528775 0.3480776 11.235119 9
GAAAT 541295 0.34734502 5.873679 12
GATGA 623300 0.3469191 8.991711 7
TCTGC 492525 0.34482014 9.710933 17
AGTCT 517970 0.34096494 8.971232 14
GAGGA 679785 0.34024206 6.3482914 3
AATTG 548480 0.33947408 8.073961 11
CATCT 415875 0.33567822 6.2721963 7
TTGGG 715180 0.3330192 11.643887 16
ACCTA 395235 0.3307478 6.1179786 4
ATTGA 530890 0.328587 8.078 12
TACCC 365735 0.32551226 5.405208 1
GCACC 404590 0.3238182 7.364935 3
CTAGA 473635 0.32324374 5.0583053 1
TCGAG 542395 0.3210747 7.4774184 1
AATAT 439800 0.31383184 12.873909 13
TGTGC 547540 0.3126259 9.90242 14
ATATT 452000 0.31109926 12.427981 14
CGAGG 579810 0.3086465 6.7174416 2
CGTAA 448385 0.30601126 12.323843 9
CTTTA 414230 0.30322248 5.051138 15
GCACG 456465 0.29794654 11.819201 6
GTACA 436175 0.29767823 5.539703 15
CTCGC 380770 0.29394603 5.5929728 26
CAGAG 466605 0.28636572 5.113927 17
ACGTA 418325 0.2854961 12.326391 8
ATGCT 431240 0.28387302 5.807776 6
GGAGC 526155 0.28008467 6.717562 5
GTCTA 423250 0.27861348 8.895144 15
CTAGT 421180 0.27725083 7.9148397 17
GCCCC 315870 0.26887706 5.672812 14
TCGCC 341625 0.26372698 5.00729 27
AGCAT 385405 0.263029 5.0967956 4
TATGC 391560 0.2577528 5.7917824 5
TAGAC 375660 0.25637832 5.0496173 2
TTGGC 440290 0.25138995 8.129555 17
GCTCC 325445 0.25123638 5.768248 11
TCTAG 377840 0.24872133 8.173271 16
CCATC 275945 0.24559717 6.813954 6
ATCGG 409965 0.24268174 5.1497884 15
AATCG 350895 0.23947683 5.9309297 14
AGCCC 294565 0.23575844 6.0511 10
GCCTA 323005 0.23445249 5.957771 2
AAGTG 418415 0.2328833 5.5217247 3
CCTCA 259460 0.23092516 5.7567725 17
CCCCT 240235 0.22740309 6.2902346 15
ACACT 270095 0.22602585 6.006613 13
ACAGC 297240 0.22368358 5.3678074 16
GTATT 370680 0.221291 5.2656636 21
AGGAG 437915 0.21918267 6.317674 4
TGCCT 311420 0.2180273 6.028261 1
GCGTG 418520 0.21488723 6.79093 20
GTTCA 320780 0.21116036 5.177372 10
CCCTC 220870 0.20907246 6.1475406 16
CAGCC 260845 0.20877026 5.396708 17
GGCGT 399355 0.20504709 7.0739956 19
TGGCG 388265 0.19935295 6.8241205 18
TACAC 183620 0.15366025 5.927345 12